alkD {fishmethods}

Sample Size Determination for Age Subsampling Using the D statistic

Description

Calculates the D statistic (sqrt of accumulated variance among ages; Lai 1987) for a range of age sample sizes using data from an age-length key. Assumes a two-stage random sampling design with proportional or fixed allocation.

Usage

alkD(x, lss = NULL, minss = NULL, maxss = NULL, sampint = NULL, 
    allocate = 1)

Arguments

x

a data frame containing an age-length key (similar to Table 8.3 on page 307 of Quinn and Deriso (1999)). The first column must contain the length intervals as numeric labels (no ranges), the second column must contain the number of samples within each length interval (Ll in Q & D), and the third and remaining columns must contain the number of samples for each age class within each length interval (one column for each age class). Column labels are not necessary but are helpful. Columns l and Al in Table 8.3 should not be included. Empty cells must contain zeros.

lss

the sample size for length frequency

minss

the minimum age sample size

maxss

the maximum age sample size. Value can not be larger than the sample size for the length frequency(lss)

sampint

the sample size interval

allocate

the type of allocation: 1=proportional, 2=fixed.

Details

Following Quinn and Deriso (1999:pages 308-309), the function calculates the D statistic (sqrt of accumulated variance among ages; Lai 1987) for a range of age sample sizes defined by minss, maxss, and sampint at a given length sample size lss. The size of an age sample at a desired level of D can be obtained by the comparison. See reference to Table 8.8, p. 314 in Quinn and Deriso.

Value

label

list element containing the summary of input criteria

comp2

list element containing the D statistic for each age sample size given lss

Author(s)

Gary A. Nelson, Massachusetts Division of Marine Fisheries [e-mail]

References

Quinn, T. J. and R. B. Deriso. 1999. Quantitative Fish Dynamics. Oxford University Press, New York, New York. 542 pages

Lai, H.L. 1987. Optimum allocation for estimating age composition using age-length keys. U.S. Fish. Bull. 85:179-185

See Also

alkss alkprop

Examples

data(alkdata)
alkD(alkdata,lss=1000,minss=25,maxss=1000,sampint=20,allocate=1)