Filter Raw JSATS Acoustic Telemetry Files from Lotek, ATS, Teknologic

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Documentation for package ‘filteRjsats’ version 1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

add_fish	Add Fish Data from ERDAPP to a Detection Dataframe
cft_fish	Example fish data from CalFishTrack
cft_rcvrs	Example receiver data from CalFishTrack
compare_detects	Compare two Detection Dataframes
filtered_detections	Previously filtered detection data
filter_fish_detects	Example fish detection data which has been prefiltered and has fish data
fish	Fish Data
fish_detects	Example fish detection data
format_detects	Format Detections for filteRjsats
format_fish	Format Fish Data for add_fish()
format_receivers	Format for Receiver data for filteRjsats
get_fish_fields	Get A List of Fish Related Fields from ERDAPP
get_rcvr_data	Get A Dataframe of All Receiver Data from CalFishTrack
get_rcvr_fields	Get A List of Receiver Related Fields from ERDAPP
get_receiver_type	Get Receiver Type
get_reference_tags	Get A List of Reference (Beacon) Tags from ERDAPP
get_tagged_fish	Get A Dataframe of All Tagged fish from CalFishTrack
join_rcvr_data	Add Receiver Data to a Completely Filtered Detection File
prefilter	Apply the "prefilter" to a Detection Dataframe
prefiltered_detects	Example Prefiltered Detection Dataframe
raw_ats	Example raw data from ats receiver after being read in by read_jsats
rcvr_fields	A List of Important Receiver Related Fields from ERDAPP
read_ats	Read an ATS Acoustic Receiver File
read_jsats	Read an Acoustic Receiver File
read_lotek	Read a Lotek Acoustic Receiver File
read_tekno	Read a Teknologic Acoustic Receiver File
receivers	Receiver Data
reftags	Example reference tags
rolling_sd_3	Calculate Standard Deviation Over a Rolling Window of 3
second_filter_2h4h	Two or Four Hit Filter for Any Detection File
second_filter_4h	Four Hit Filter for Any Detection File
second_filter_ats	Two Hit Filter for ATS Detections
second_filter_ats_4h	Four Hit Filter for ATS Detections
second_filter_lotek	Four Hit Filter for Lotek Detections
second_filter_tekno	Two Hit Filter for Teknologic Detections
second_filter_tekno_4h	Four Hit Filter for Tekno Detections
Set_GVs	Add in Global Variables