rmatCalc {fcros}

Calculation of the FC matrix using pairwise comparisons

Description

This is an internal function for using a C code to calculate a vector form of the matrix of fold changes using pairwise comparison of data samples.

Usage

rmatCalc(fvect, n, m1, m2)

Arguments

fvect

Two biological conditions dataset matrix

n

Number of genes or probes in the dataset

m1

Number of samples in the first biological condition

m2

Number of samples in the second biological condition

Author(s)

Doulaye Dembele [e-mail]

References

Dembele D and Kaster P, Fold change rank ordering statistics: a new method for detecting differentially expressed genes, BMC bioinformatics, 2014, 15:14

Dembele D and Kastner P, Comment on: Fold change rank ordering statistics: a new method for detecting differentially expressed genes, BMC Bioinformatics, 2016, 17:462

Examples

#    data(fdata);