evobiR-package |
evobiR: Evolutionary Biology in R |
1.fasta |
simulated SNP data |
2.fasta |
simulated SNP data |
3.fasta |
simulated SNP data |
AICc |
Computes an AICc score |
AncCond |
Calculate the mean of a continuous character at the origin of derived state of a binary charachter |
CalcD |
Calculate Patterson's D-statistic |
CalcPopD |
Calculate Patterson's D-statistic |
Even |
Tests whether a number is even |
evobiR |
evobiR: Evolutionary Biology in R |
FuzzyMatch |
Find Close Matches in a tree and dataset |
horn.beetle.csv |
Gnatocerus measurements |
hym.tree |
Phylogenetic tree |
mcmc2 |
mcmc log file |
mcmc3 |
mcmc log file |
mite.trait |
phenotype data for mites |
Mode |
Calcualtes the mode of a numeric vector |
PPSDiscrete |
Create Simulated Datasets via PPS |
ReorderData |
Reorders trait data to match the order of tips in a tree |
ResSel |
Selection on Residuals |
SampleTrees |
Select a random sample of trees |
SlidingWindow |
Sliding window analysis |
SuperMatrix |
creates a supermatrix from multiple gene alignments |
trees |
10 Phylogenetic trees |
trees.mite |
10 Phylogenetic trees |
trees.nex |
100 Phylogenetic trees |
ViewEvo |
Learning Resources |
WinCalcD |
Calculate Patterson's D-statistic in sliding windows |