adjustModel |
Genotype coding adjusement |
calculateEvianMLE |
Profile likelihood calculation using regression models |
calculateGLR |
Profile likelihood calculation using regression models |
densityPlot |
Plot profile likelihood density for a single SNP. |
evian |
Evidential analysis for genetic data using regression models |
evian_binary_bim |
Example map data for evian_binary_raw. |
evian_binary_raw |
Example dataset with a binary outcome. |
evian_linear_bim |
Example map data for evian_linear_raw. |
evian_linear_raw |
Example dataset with a quantative outcome. |
expandBound |
A recursive function that expands the grid search for MLE. |
getGridBound |
Obtain the range of the grid where MLE will be searched at |
glr |
Generalized Likelihood Ratio test |
glr_plot |
Plot methods for multiple glr result in a genomic region. |
multiLine_plot |
Plot methods for multiple likelihood intervals in a genomic region. |
robust_forCluster |
Robust adjustment function |
subsetData |
interior subsetting function |