ModelSIRDCONN {epiworldR}R Documentation

Susceptible Infected Removed Deceased model (SIRD connected)

Description

Susceptible Infected Removed Deceased model (SIRD connected)

Usage

ModelSIRDCONN(
  name,
  n,
  prevalence,
  contact_rate,
  transmission_rate,
  recovery_rate,
  death_rate
)

## S3 method for class 'epiworld_sirdconn'
plot(x, main = get_name(x), ...)

Arguments

name

String. Name of the virus

n

Number of individuals in the population.

prevalence

Double. Initial proportion of individuals with the virus.

contact_rate

Numeric scalar. Average number of contacts per step.

transmission_rate

Numeric scalar between 0 and 1. Probability of transmission.

recovery_rate

Numeric scalar between 0 and 1. Probability of recovery.

death_rate

Numeric scalar between 0 and 1. Probability of death.

x

Object of class SIRDCONN.

main

Title of the plot

...

Currently ignore.

Details

The initial_states function allows the user to set the initial state of the model. The user must provide a vector of proportions indicating the following values: (1) proportion of non-infected agents already removed, and (2) proportion of non-ifected agents already deceased.

Value

The plot function returns a plot of the SIRDCONN model of class epiworld_model.

See Also

epiworld-methods

Other Models: ModelDiffNet(), ModelSEIR(), ModelSEIRCONN(), ModelSEIRD(), ModelSEIRDCONN(), ModelSIR(), ModelSIRCONN(), ModelSIRD(), ModelSIRLogit(), ModelSIS(), ModelSISD(), ModelSURV(), epiworld-data

Examples

model_sirdconn <- ModelSIRDCONN(
  name                = "COVID-19",
  n                   = 100000,
  prevalence          = 0.01,
  contact_rate        = 5,
  transmission_rate   = 0.4,
  recovery_rate       = 0.5,
  death_rate          = 0.1
)
  
# Running and printing
run(model_sirdconn, ndays = 100, seed = 1912)
model_sirdconn

plot(model_sirdconn,  main = "SIRDCONN Model")
[Package epiworldR version 0.1-0 Index]