EuropeCovid2 {epidemia}R Documentation

Covid-19 data for European countries

Description

Similar to EuropeCovid, with the following exceptions. Daily death data is obtained from the WHO COVID-19 Explorer as of 05/01/2021. This differs from the data used in Flaxman et al. (2020), because counts were updated retrospectively by the WHO as new information came to light. Daily case data is also included from the same source. This data runs from 03/01/2020 until 30/06/2020.

Usage

EuropeCovid2

Format

A named list. The fields are:

data

A data frame giving indicators of certain non-pharmaceutical interventions in each country, along with death data and populations.

inf2death

A numeric vector representing the time distribution from infection to death.

si

The serial interval of covid-19 assumed in Flaxman et al. (2020).

References

Flaxman S, Mishra S, Gandy A, Unwin HJT, Mellan TA, Coupland H, Whittaker C, Zhu H, Berah T, Eaton JW, Monod M, Perez-Guzman PN, Schmit N, Cilloni L, Ainslie KEC, Baguelin M, Boonyasiri A, Boyd O, Cattarino L, Cooper LV, Cucunub√° Z, Cuomo-Dannenburg G, Dighe A, Djaafara B, Dorigatti I, van Elsland SL, FitzJohn RG, Gaythorpe KAM, Geidelberg L, Grassly NC, Green WD, Hallett T, Hamlet A, Hinsley W, Jeffrey B, Knock E, Laydon DJ, Nedjati-Gilani G, Nouvellet P, Parag KV, Siveroni I, Thompson HA, Verity R, Volz E, Walters CE, Wang H, Wang Y, Watson OJ, Winskill P, Xi X, Walker PGT, Ghani AC, Donnelly CA, Riley SM, Vollmer MAC, Ferguson NM, Okell LC, Bhatt S, Team ICCR (2020). “Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe.” Nature. ISSN 1476-4687, doi: 10.1038/s41586-020-2405-7.


[Package epidemia version 1.0.0 Index]