ACGH {ecp}R Documentation

Bladder Tumor Micro-Array Data

Description

Micro-array data for 43 different individuals with a bladder tumor.

Usage

data(ACGH)

Format

A list with the following components.

data: The micro-array data for 43 individuals. This information is stored in a 2215 by 43 matrix.

individual: A numeric vector indicating which individuals' mico-array data are present.

Source

Bleakley K., Vert J.-P. (2011), The group fused Lasso for multiple change-point detection

N. Stransky, C. Vallot, F. Reyal, I. Bernard-Pierrot, S.G. Diez de Mediana, R. Segraves, Y. de Rycke, P. Elvin, A. Cassidy, C. Sparaggon, A. Graham, j. Southgate, B. Asselain, Y. Allory, C. C. Addou, D. G. Albertson, J.-P. Thiery, D. K. Chopin, D. Pinkel, and F. Radvanyi. Regional copy number-independent deregulation of transcription in cancer. Nat. Genet., 38(12):1386-1396, Dec 2006

References

Bleakley K., Vert J.-P. (2011), The group fused Lasso for multiple change-point detection

Nicholas A. James, David S. Matteson (2014). "ecp: An R Package for Nonparametric Multiple Change Point Analysis of Multivariate Data.", "Journal of Statistical Software, 62(7), 1-25", URL "http://www.jstatsoft.org/v62/i07/"

Examples

data(ACGH, package="ecp")

[Package ecp version 3.1.3 Index]