Coalescent-Based Simulation of Ecological Communities


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Documentation for package ‘ecolottery’ version 1.0.0

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ecolottery-package Coalescent-Based Simulation of Ecological Communities
abund Compute absolute and relative abundances in the local community and the reference pool
coalesc Coalescent-based simulation of ecological communities undergoing both neutral and niche-base dynamics
coalesc_abc Estimation of neutral and non-neutral parameters of community assembly using Approximate Bayesian Computation (ABC)
do.simul Estimation of neutral and non-neutral parameters of community assembly using Approximate Bayesian Computation (ABC)
ecolottery Coalescent-Based Simulation of Ecological Communities
forward Simulation of neutral and niche-based community dynamics forward in time
get_number_of_gens Simulation of neutral and niche-based community dynamics forward in time
pick Simulation of neutral and niche-based community dynamics forward in time
pick.immigrate Simulation of neutral and niche-based community dynamics forward in time
pick.mutate Simulation of neutral and niche-based community dynamics forward in time
plot_comm Regional vs. Local trait distributions of abundances
tcor Generates Correlated Traits