annotation_dictionary |
Annotations of published data |
ants_L0_flat |
Joined and flat version of EDI data package knb-lter-hfr.118.33 |
ants_L1 |
The ecocomDP (L1) version of EDI data package knb-lter-hfr.118.33 |
calc_geo_extent_bounding_box_m2 |
Calculate geo_extent_bounding_box_m2 for the dataset_summary table |
calc_length_of_survey_years |
Calculate length_of_survey_years for the dataset_summary table |
calc_number_of_years_sampled |
Calculate number_of_years_sampled for the dataset_summary table |
calc_std_dev_interval_betw_years |
Calculate std_dev_interval_betw_years for the dataset_summary table |
convert_to_dwca |
Convert a dataset to the Darwin Core Archive format |
create_dataset_summary |
Create the dataset_summary table |
create_eml |
Create EML metadata |
create_location |
Create the location table |
create_location_ancillary |
Create the location_ancillary table |
create_observation |
Create the observation table |
create_observation_ancillary |
Create the observation_ancillary table |
create_taxon |
Create the taxon table |
create_taxon_ancillary |
Create the taxon_ancillary table |
create_variable_mapping |
Create the variable_mapping table |
flatten_data |
Flatten a dataset |
plot_sample_space_time |
Plot dates and times samples were collected or observations were made |
plot_sites |
Plot sites on US map |
plot_taxa_abund |
Plot mean taxa abundances per 'observation_id' |
plot_taxa_accum_sites |
Plot taxa accumulation by site accumulation |
plot_taxa_accum_time |
Plot taxa accumulation through time |
plot_taxa_diversity |
Plot diversity (taxa richness) through time |
plot_taxa_occur_freq |
Plot taxon occurrence frequencies |
plot_taxa_rank |
Plot taxa ranks |
plot_taxa_shared_sites |
Plot number of unique taxa shared across sites |
read_data |
Read published data |
save_data |
Save a dataset |
search_data |
Search published data |
validate_data |
Validate tables against the model |
write_tables |
Write tables to file |