# Empirical Bayes Multi-State Cox Model ## Help Pages

 ebmstate-package Empirical Bayes multi-state Cox model boot_coxrfx Bootstrap confidence intervals for regression coefficients boot_ebmstate Bootstrap samples and bootstrap interval estimates boot_probtrans Bootstrap confidence intervals for transition probabilities CIs_for_target_state Ancillary function of 'boot_ebmstate'. convolute_Markov Convolution function for Markov models convolute_semiMarkov Convolution function for semi-Markov models CoxRFX Empirical Bayes, multi-state Cox model coxrfx_object_sample Example of an empirical Bayes model fit cumhazCIs_for_target_transition Ancillary function of 'boot_ebmstate'. cumhaz_splines Spline approximations of the cumulative hazard functions extract_function Ancillary function to 'boot_ebmstate'. joint_cum_hazard_function Compute the cumulative hazard of leaving a given state loo_ebmstate Leave-one-out estimation MakeInteger Convert factor to integer. msfit_generic Compute subject-specific transition hazards. msfit_generic.coxrfx Compute subject-specific transition hazards. msfit_generic.default Compute subject-specific transition hazards. msfit_object_sample Estimated cumulative hazard rates under an empirical Bayes Cox model (example) mstate_data_sample A simulated event-history data set print.coxrfx Print method for CoxRFX objects print.msfit Print method for 'msfit' objects generated by 'msfit_generic' probtrans_by_convolution Compute all transition probabilities from a given state using convolution probtrans_by_convolution_Markov Compute transition probabilities under a non-homogeneous Markov model using a convolution algorithm. probtrans_by_convolution_semiMarkov Compute transition probabilities under a semi-Markov model using a convolution algorithm. probtrans_ebmstate Compute subject-specific transition probabilities using convolution. probtrans_mstate Compute subject-specific or overall transition probabilities probtrans_mstate.coxrfx Compute subject-specific or overall transition probabilities probtrans_mstate.default Compute subject-specific or overall transition probabilities successful_transitions Find the unique possible path until an absorbing state summary.coxrfx A summary method for CoxRFX models unique_paths Find all possible paths until absorption from a given starting state