Access and Analyze eBird Status and Trends Data


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Documentation for package ‘ebirdst’ version 0.2.2

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abundance_palette eBird Status and Trends color palettes for abundance data
bernoulli_dev Bernoulli deviance
calc_bins Calculates bins (breaks) based for mapping
calc_effective_extent Calculate and map effective extent of selected centroids
calc_full_extent Calculates spatial extent of non-zero data from Raster* object for plotting
compute_ppms Computes the Predictive Performance Metrics for a spatiotemporal extent
date_to_st_week Get the status and trends week that a date falls into
ebirdst 'ebirdst': Tools to Load, Map, Plot, and Analyze eBird Status and Trends Data Products
ebirdst_download Download eBird Status and Trends Data
ebirdst_extent Construct a spatiotemporal extent object to subset Status and Trends data
ebirdst_extent.bbox Construct a spatiotemporal extent object to subset Status and Trends data
ebirdst_extent.numeric Construct a spatiotemporal extent object to subset Status and Trends data
ebirdst_extent.sf Construct a spatiotemporal extent object to subset Status and Trends data
ebirdst_extent.sfc Construct a spatiotemporal extent object to subset Status and Trends data
ebirdst_predictors eBird Status and Trends predictors
ebirdst_runs Data frame of available eBird Status and Trends species
ebirdst_subset Subset eBird Status and Trends data spatiotemporally
ebirdst_subset.data.frame Subset eBird Status and Trends data spatiotemporally
ebirdst_subset.Raster Subset eBird Status and Trends data spatiotemporally
ebirdst_subset.sf Subset eBird Status and Trends data spatiotemporally
get_species_path Get the data package path for a given species
label_raster_stack Labels 52 week RasterStack with the dates for each band
load_fac_map_parameters Load full annual cycle map parameters
load_pis Load predictor importances for single species eBird Status and Trends products
load_raster Load eBird Status and Trends raster data
load_test_preds Test data predictions loader
map_centroids Map PI centroid locations
parse_raster_dates Parses the names attached to a Raster from label_raster_stack()
plot_all_ppms Plot all predictive performance metrics
plot_binary_by_time Plot binary occurrence metrics by time
plot_pis Plot predictor importances boxplot
poisson_dev Poisson deviance
project_extent Transform a spatiotemporal extent to a different CRS
sample_case_control Spatial grid sampling methods
sample_grid Spatial grid sampling methods
stixelize Generate stixel polygons from PI data
stixelize.data.frame Generate stixel polygons from PI data
stixelize.sf Generate stixel polygons from PI data