Access and Analyze eBird Status and Trends Data
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Documentation for package ‘ebirdst’ version 0.3.3
Help Pages
| abundance_palette | eBird Status and Trends color palettes for mapping |
| bernoulli_dev | Bernoulli deviance |
| binom_test_p | Binomial test for ensemble support |
| calc_bins | Calculates relative abundance bins (breaks) based for mapping |
| calc_full_extent | Calculate the spatial extent of non-zero data in a raster |
| date_to_st_week | Get the Status and Trends week that a date falls into |
| ebirdst | 'ebirdst': Tools to Load, Map, Plot, and Analyze eBird Status and Trends Data Products |
| ebirdst_download | Download eBird Status and Trends Data |
| ebirdst_extent | Construct a spatiotemporal extent object to subset Status and Trends data |
| ebirdst_extent.bbox | Construct a spatiotemporal extent object to subset Status and Trends data |
| ebirdst_extent.numeric | Construct a spatiotemporal extent object to subset Status and Trends data |
| ebirdst_extent.sf | Construct a spatiotemporal extent object to subset Status and Trends data |
| ebirdst_extent.sfc | Construct a spatiotemporal extent object to subset Status and Trends data |
| ebirdst_habitat | eBird Status and Trends predictive habitat associations |
| ebirdst_ppms | eBird Status and Trends predictive performance metrics (PPMs) |
| ebirdst_ppms_ts | Time series of eBird Status and Trends PPMs summarized temporally |
| ebirdst_predictors | eBird Status and Trends predictors |
| ebirdst_runs | Data frame of available eBird Status and Trends species |
| ebirdst_subset | Subset eBird Status and Trends data spatiotemporally |
| ebirdst_subset.data.frame | Subset eBird Status and Trends data spatiotemporally |
| ebirdst_subset.Raster | Subset eBird Status and Trends data spatiotemporally |
| ebirdst_subset.sf | Subset eBird Status and Trends data spatiotemporally |
| ebirdst_weeks | eBird Status and Trends weeks |
| get_species | Get eBird species code for a set of species |
| get_species_path | Get the data package path for a given species |
| label_raster_stack | Label data cubes with the week date for each band |
| load_config | Load eBird Status and Trends configuration file |
| load_fac_map_parameters | Load full annual cycle map parameters |
| load_pds | Load eBird Status and Trends partial dependence data |
| load_pis | Load eBird Status and Trends predictor importance data |
| load_predictions | Load eBird Status and Trends test data predictions |
| load_raster | Load eBird Status and Trends raster data cubes |
| load_stixels | Load summary data for eBird Status and Trends stixels |
| parse_raster_dates | Parse data cube layer names into dates |
| plot.ebirdst_habitat | eBird Status and Trends predictive habitat associations |
| plot.ebirdst_ppms | eBird Status and Trends predictive performance metrics (PPMs) |
| plot.ebirdst_ppms_ts | Time series of eBird Status and Trends PPMs summarized temporally |
| plot.stixel_footprint | Calculate the spatial footprint of a set of stixels |
| plot_pds | Plot partial dependency (PD) line plots |
| plot_pis | Plot predictor importance (PI) box plots |
| poisson_dev | Poisson deviance |
| project_extent | Transform a spatiotemporal extent to a different CRS |
| sample_case_control | Spatiotemporal sampling of points on a grid |
| sample_grid | Spatiotemporal sampling of points on a grid |
| set_ebirdst_access_key | Store the eBird Status and Trends access key |
| stixelize | Generate polygons for eBird Status and Trends stixels |
| stixel_footprint | Calculate the spatial footprint of a set of stixels |