eDITH-package |
Model Transport of Environmental DNA In River Networks |
dataC |
eDNA concentration data |
dataCD |
eDNA concentration and direct observation data |
dataRead |
eDNA read number data |
eDITH |
Model Transport of Environmental DNA In River Networks |
eval_posterior_eDITH |
Evaluate posterior predictions from an eDITH run |
outSample |
Posterior sample from fitted eDITH model |
posterior_pred_sim_eDITH |
Predictive posterior simulations from an eDITH run |
run_eDITH_BT |
Run eDITH with BayesianTools |
run_eDITH_BT_joint |
Run eDITH with BayesianTools based on joint eDNA and direct sampling data |
run_eDITH_optim |
Optimize eDITH |
run_eDITH_optim_joint |
Optimize eDITH based on joint eDNA and direct sampling data |
run_eDITH_single |
Run eDITH for a single parameter set |
sampling_strategy_direct |
Determine optimal spatial arrangement for direct sampling |
sampling_strategy_eDNA |
Determine optimal spatial arrangement for eDNA sampling |
wigger |
River Wigger |