plot_simulation_expression {dyngen}

Visualise the expression of the simulations over simulation time

Description

Visualise the expression of the simulations over simulation time

Usage

plot_simulation_expression(
  model,
  simulation_i = 1:4,
  what = c("mol_premrna", "mol_mrna", "mol_protein"),
  facet = c("simulation", "module_group", "module_id", "none"),
  label_nonzero = FALSE
)

Arguments

model

A dyngen intermediary model for which the simulations have been run with generate_cells().

simulation_i

Which simulation to visualise.

what

Which molecule types to visualise.

facet

What to facet on.

label_nonzero

Plot labels for non-zero molecules.

Value

A ggplot2 object.

Examples

data("example_model")
plot_simulation_expression(example_model)