| getTransitionMatrix {drimmR} | R Documentation |
Transition matrix of the drifting Markov Model
Description
Generic function evaluating the transition matrix of a model x at a given position pos
Usage
getTransitionMatrix(x, pos)
Arguments
x |
An object for which the transition matrices of the DMM can be computed. |
pos |
A positive integer giving the position along the sequence on which the transition matrix of the DMM should be computed |
Value
A transition matrix at a given position
Author(s)
Victor Mataigne, Alexandre Seiller
References
Barbu VS, Vergne N (2018). “Reliability and survival analysis for drifting Markov models: modelling and estimation.” Methodology and Computing in Applied Probability, 1–33. doi: 10.1007/s11009-018-9682-8, https://doi.org/10.1007/s11009-018-9682-8. Vergne N (2008). “Drifting Markov models with polynomial drift and applications to DNA sequences.” Statistical Applications in Genetics Molecular Biology , 7(1) . doi: 10.2202/1544-6115.1326, https://doi.org/10.2202/1544-6115.1326.