colorTrees {dowser}

R Documentation

Get a color palette for a predefined set of trait values

Description

colorTree Gets a color palette for a predefined set of trait values

Usage

colorTrees(trees, palette, ambig = "blend")

Arguments

trees	list of phylo objects with assigned internal node states
palette	named vector of colors (see getPalette)
ambig	how should ambiguous states be colored (blend or grey)

Details

Trees must have node states represented in a "states" vector. By default, ambiguous states (separated by ",") have their colors blended. If

Value

A list of colored trees

See Also

getPalette, getTrees, plotTrees

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