parseClassFun,parseClass-method {doudpackage}

Make the LaTeX/HTML table

Description

This functions takes the S4 output of descTab to create an HTML parsed table

Usage

## S4 method for signature 'parseClass'
parseClassFun(
  table,
  col.order = NULL,
  levels_to_keep = NULL,
  group_rows_labels = NULL
)

Arguments

table

The output of descTab() or anaBiv(), an S4 object.

col.order

Optional. A vector containing the column order. If set, must contains at least all levels of group. Three columns created are "var", "Total", and "pvalue" which can be present in the vector

levels_to_keep

Optional, named list. If the variable is binary, which level to keep. Default is the last level of levels(variable). Must be as: list("variable name" = "level to keep").

group_rows_labels

Optional, named list. Create row labels in order to regroup them. Must be as list("label" = c("var1", "var2), "label2" = c("var3", "var4")).

Value

An HTML/LaTex file which can be used directly in Rmarkdown and copy paste

Examples

data(iris)
library(stringi)
iris$fact_1<-as.factor(as.character(sample(1:5, 150, replace = TRUE)))
n_na<-sample(1:150, 30)
iris[n_na, "fact_1"]<-NA
iris$fact_2<-as.factor(as.character(stri_rand_strings(150, 1, '[A-B]')))
iris$num<-runif(150, min = 0, max = 100)
n_na<-sample(1:150, 5)
iris[n_na, "num"]<-NA
iris_test<-descTab(iris, group = "Species", na.print = TRUE)
testParse<-parseClassFun(iris_test, levels_to_keep = list("fact_2" =  "A"),
group_rows_labels = list("Size" = c("Petal.Length", "Petal.Width"),
"My_f" = c("num", "fact_2")))