rev.dnapath_list {dnapath} | R Documentation |
Reverse the order of pathways in a 'dnapath_list' object.
Description
Reverse the order of pathways in a 'dnapath_list' object.
Usage
## S3 method for class 'dnapath_list'
rev(x, ...)
Arguments
x |
A 'dnapath_list' object from |
... |
Additional arguments are ignored. |
Value
A 'dnapath_list' object containing the pathways in 'x' in reverse order.
Examples
data(meso)
data(p53_pathways)
set.seed(0)
results <- dnapath(x = meso$gene_expression, pathway_list = p53_pathways,
group_labels = meso$groups, n_perm = 10)
# Filter out pathways that have p-values above 0.2.
results <- filter_pathways(results, 0.2)
results <- sort(results, by = "dc_score") # Sort by the pathway DC score.
results <- rev(results) # Reverse the ordering.
[Package dnapath version 0.7.4 Index]