Tools for Analysis of Diversity and Similarity in Biological Systems

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Documentation for package ‘divo’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

cvg	cvg Coverage
divo	Tools for Analysis of Diversity and Similarity in Biological Systems
dp	dp Diversity Profile
dp.ht	dp.ht Diversity Profile with the Horvitz-Thompson Adjustment
ens	ens Effective Number of Species
ens.ht	ens.ht Effective Number of Species with the Horvitz-Thompson Correction
i.in	i.in Information Index (I index) for 2-Way Table
i.inp	i.inp Information Index (I index) for 2-Way, 2 Column Table
ji	ji Jaccard Index
li	li Sorensen Index
mh	mh Morisita-Horn Index
pg	pg Power-Geometric Index
pg.ht	pg.ht Power-Geometric Index with the Horvitz-Thompson Correction
rd	rd Renyi's Divergence
srd	srd Symmetrized Renyi's Divergence
TCR.Data	TCR.Data Repertoires of Naive and Regulatory T-cell Populations
x	Example dataset for divo package