Discordance and Concordance of Transcriptomic Responses

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Documentation for package ‘disco’ version 0.6

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as S4 class for disco
corOrt Calculate ortholog gene correlation coefficients
disco.score Calculate concordance score for differentially expressed genes in two data sets
makeMatchedOrtholog Create an object of class matchedOrtholog
makeSummary Common modules in specified comparisons
matchedOrtholog-class S4 class for disco
modCor Calculate correlation between regulation of orthologous genes in a chosen gene set
orthologs Example ortholog data set
percentGenes Calculates percentage of present genes from a specified superset of expression modules
plotDisco plots log2FC of the corresponding genes against each other
show-method S4 class for disco