.data_read {diffEnrich}R Documentation

.data_read

Description

This function reads in the text files generated from a previous get_kegg call and saves them as a names list formatted for down stream analysis.

Usage

.data_read(path = path, date = date, release = release)

Arguments

path

character. A character string describing the path to write out KEGG API data sets. If not provided, defaults to current working directory.

date

character. A character string describing the date that was used to time stamp files from previous call. Must be formatted like YYYY-MM-DD.

release

character. A character string describing the KEGG release that was used to time stamp files from previous call (e.g. "90" or "92")

Value

kegg_out: A named list of the data pulled from kegg api when the function was run. This may be different if the function is run at different times. For reproducible results, use text files generated by function that include the date they were pulled.


[Package diffEnrich version 0.1.2 Index]