Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations


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Documentation for package ‘dgpsi’ version 2.1.5

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combine Combine layers
continue Continue the training of a DGP emulator
dgp Deep Gaussian process emulator construction
gp Gaussian process emulator construction
Hetero Initialize a heteroskedastic Gaussian likelihood node
init_py 'python' environment initialization
kernel Initialize a Gaussian process node
lgp Linked (D)GP emulator construction
NegBin Initialize a negative Binomial likelihood node
nllik Calculate negative predicted log-likelihood
plot Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.dgp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.gp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.lgp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
Poisson Initialize a Poisson likelihood node
predict Predictions from GP, DGP, or linked (D)GP emulators
predict.dgp Predictions from GP, DGP, or linked (D)GP emulators
predict.gp Predictions from GP, DGP, or linked (D)GP emulators
predict.lgp Predictions from GP, DGP, or linked (D)GP emulators
read Load the stored emulator
set_linked_idx Set linked indices
summary Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.dgp Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.gp Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.lgp Summary of a constructed GP, DGP, or linked (D)GP emulator
trace_plot Plot of DGP model parameter traces
validate Validate a constructed GP, DGP, or linked (D)GP emulator
validate.dgp Validate a constructed GP, DGP, or linked (D)GP emulator
validate.gp Validate a constructed GP, DGP, or linked (D)GP emulator
validate.lgp Validate a constructed GP, DGP, or linked (D)GP emulator
write Save the constructed emulator