Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations

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Documentation for package ‘dgpsi’ version 2.4.0

Help Pages

alm Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.bundle Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.dgp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.gp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
combine Combine layers
continue Continue the training of a DGP emulator
design Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.bundle Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.dgp Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.gp Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
dgp Deep Gaussian process emulator construction
draw Validation plots of a sequential design
draw.bundle Validation plots of a sequential design
draw.dgp Validation plots of a sequential design
draw.gp Validation plots of a sequential design
gp Gaussian process emulator construction
Hetero Initialize a heteroskedastic Gaussian likelihood node
init_py 'python' environment initialization
kernel Initialize a Gaussian process node
lgp Linked (D)GP emulator construction
mice Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.bundle Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.dgp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.gp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
NegBin Initialize a negative Binomial likelihood node
nllik Calculate negative predicted log-likelihood
pack Pack GP and DGP emulators into a bundle
pei Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.bundle Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.dgp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.gp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
plot Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.dgp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.gp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.lgp Validation plots of a constructed GP, DGP, or linked (D)GP emulator
Poisson Initialize a Poisson likelihood node
predict Predictions from GP, DGP, or linked (D)GP emulators
predict.dgp Predictions from GP, DGP, or linked (D)GP emulators
predict.gp Predictions from GP, DGP, or linked (D)GP emulators
predict.lgp Predictions from GP, DGP, or linked (D)GP emulators
prune Static pruning of a DGP emulator
read Load the stored emulator
set_imp Reset number of imputations for a DGP emulator
set_linked_idx Set linked indices
set_seed Random seed generator
summary Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.dgp Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.gp Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.lgp Summary of a constructed GP, DGP, or linked (D)GP emulator
trace_plot Plot of DGP model parameter traces
unpack Unpack a bundle of (D)GP emulators
update Update a GP or DGP emulator
update.dgp Update a GP or DGP emulator
update.gp Update a GP or DGP emulator
validate Validate a constructed GP, DGP, or linked (D)GP emulator
validate.dgp Validate a constructed GP, DGP, or linked (D)GP emulator
validate.gp Validate a constructed GP, DGP, or linked (D)GP emulator
validate.lgp Validate a constructed GP, DGP, or linked (D)GP emulator
vigf Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using VIGF
vigf.bundle Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using VIGF
vigf.dgp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using VIGF
vigf.gp Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using VIGF
window Trim the sequences of model parameters of a DGP emulator
write Save the constructed emulator