Detrend Images

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Documentation for package ‘detrendr’ version 0.6.15

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

detrendr-package	detrendr: Image detrending in R.
apply_on_pillars	Apply a function to each pillar of a 3-dimensional array.
best_degree	Find the best polynomial degree for polynomial detrending.
best_l	Find the best length parameter for boxcar detrending.
best_swaps	Find the best 'swaps' parameter for _Robin Hood_ detrending.
best_tau	Find the best tau parameter for exponential smoothing detrending.
brightness_pillars	Get the brightness of pillars of a 3d array.
detrend-directory	Detrend all TIFF images in an entire folder.
detrended_img	Detrended image class.
detrending	Detrend images.
detrendr	detrendr: Image detrending in R.
dir_detrend_boxcar	Detrend all TIFF images in an entire folder.
dir_detrend_exp	Detrend all TIFF images in an entire folder.
dir_detrend_polynom	Detrend all TIFF images in an entire folder.
dir_detrend_rh	Detrend all TIFF images in an entire folder.
dir_detrend_robinhood	Detrend all TIFF images in an entire folder.
img_detrend_boxcar	Detrend images.
img_detrend_exp	Detrend images.
img_detrend_polynom	Detrend images.
img_detrend_rh	Detrend images.
img_detrend_robinhood	Detrend images.
mean_frames	Get the sums/means of frames in a 3-dimensional array.
mean_pillars	Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.
median_pillars	Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.
pillar-stats	Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.
rfromboxes	Randomly draw balls from boxes.
rtoboxes	Randomly place balls in boxes.
sum_frames	Get the sums/means of frames in a 3-dimensional array.
sum_pillars	Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.
var_pillars	Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.