exampleArrayDesignTable {designGG}R Documentation

Example output of ArrayDesignTable data

Description

exampleArrayDesignTable: Example data of exampleArrayDesignTable for a hypothetical dual-channel microarray experiment in which there are 100 strains (e.g. recombinant inbred lines) and 27 arrays available. Two environmental factors (temperature and cell type) are considered in this experiment. There are three levels for temperature (15, 24 and 29) and four levels for cell types (A,B,C,D). This table tells how to pair samples into arrays.

data(exampleArrayDesignTable) 
exampleArrayDesignTable[1:5,]
Channel 1 Channel 2
array1 Strain28 Strain92
array2 Strain70 Strain47
array3 Strain22 Strain89
array4 Strain45 Strain15
array5 Strain52 Strain41

Usage

data(exampleArrayDesignTable)

Format

exampleArrayDesignTable: 27 arrays by two channels.

Author(s)

Yang Li <yang.li@rug.nl>, Gonzalo Vera <gonzalo.vera.rodriguez@gmail.com>
Rainer Breitling <r.breitling@rug.nl>, Ritsert Jansen <r.c.jansen@rug.nl>

Examples

  ##load the data
  data(exampleArrayDesignTable)
  
  ##view part of the the data
  exampleArrayDesignTable[1:5,]

[Package designGG version 1.1 Index]