Clustering by Fast Search and Find of Density Peaks


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Documentation for package ‘densityClust’ version 0.3

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clustered Check whether a densityCluster object have been clustered
clustered.densityCluster Check whether a densityCluster object have been clustered
clusters Extract cluster membership from a densityCluster object
clusters.densityCluster Extract cluster membership from a densityCluster object
densityClust Calculate clustering attributes based on the densityClust algorithm
estimateDc Estimate the distance cutoff for a specified neighbor rate
findClusters Detect clusters in a densityCluster obejct
findClusters.densityCluster Detect clusters in a densityCluster obejct
plotDensityClust Plot densityCluster results
plotMDS Plot observations using multidimensional scaling and colour by cluster
plotTSNE Plot observations using t-distributed neighbor embedding and colour by cluster