heights_per_k.dendrogram {dendextend} | R Documentation |
Which height will result in which k for a dendrogram
Description
Which height will result in which k for a dendrogram. This helps with speeding up the cutree.dendrogram function.
Usage
heights_per_k.dendrogram(dend, ...)
Arguments
dend |
a dendrogram. |
... |
not used. |
Value
a vector of heights, with its names being the k clusters that will result for cutting the dendrogram at each height.
Examples
## Not run:
hc <- hclust(dist(USArrests[1:4, ]), "ave")
dend <- as.dendrogram(hc)
heights_per_k.dendrogram(dend)
## 1 2 3 4
## 86.47086 68.84745 45.98871 28.36531
cutree(hc, h = 68.8) # and indeed we get 2 clusters
unbranch_dend <- unbranch(dend, 2)
plot(unbranch_dend)
heights_per_k.dendrogram(unbranch_dend)
# 1 3 4
# 97.90023 57.41808 16.93594
# we do NOT have a height for k=2 because of the tree's structure.
## End(Not run)
[Package dendextend version 1.17.1 Index]