as.phylo.dendrogram {dendextend} | R Documentation |
Convert a dendrogram into phylo
Description
Based on as.hclust.dendrogram with as.phylo.hclust
In the future I hope a more direct link will be made.
Usage
as.phylo.dendrogram(x, ...)
Arguments
x |
a dendrogram |
... |
ignored. |
Value
A phylo class object
See Also
as.dendrogram, as.hclust, as.phylo
Examples
## Not run:
library(dendextend)
library(ape)
dend <- iris[1:30, -5] %>%
dist() %>%
hclust() %>%
as.dendrogram()
dend2 <- as.phylo(dend)
plot(dend2, type = "fan")
library(dendextend)
library(ggplot2)
# no longer needed: library(ggdendro)
dend <- iris[1:30, -5] %>%
dist() %>%
hclust() %>%
as.dendrogram()
# there is a bug in the location of the labels
# If you want to solve it - please send a Pull Request to:
# https://github.com/talgalili/dendextend/
ggplot(dend) +
scale_y_reverse(expand = c(0.2, 0)) + coord_polar(start = 1, theta="x")
## End(Not run)
# see: https://github.com/klutometis/roxygen/issues/796
#
[Package dendextend version 1.17.1 Index]