Hierarchical Models Made Easy with Data Cloning


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Documentation for package ‘dcmle’ version 0.3-1

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A C D E F G H L M N P Q R S T U V W X misc

dcmle-package Hierarchical Models Made Easy with Data Cloning

-- A --

acfplot-method Class '"MCMClist"'
acfplot-method Class '"codaMCMC"'
acfplot-method Class '"dcmle"'
as.array-method Class '"codaMCMC"'
as.array-method Class '"dcmle"'
as.matrix-method Class '"codaMCMC"'
as.matrix-method Class '"dcmle"'
as.mcmc.list-method Class '"codaMCMC"'
as.mcmc.list-method Class '"dcmle"'
autocorr.diag-method Class '"MCMClist"'
autocorr.diag-method Class '"codaMCMC"'
autocorr.diag-method Class '"dcmle"'

-- C --

chanames coda package related generic functions
chanames-method Class '"MCMClist"'
chanames-method Class '"codaMCMC"'
chanames-method Class '"dcmle"'
chisq.diag-method Class '"MCMClist"'
chisq.diag-method Class '"codaMCMC"'
chisq.diag-method Class '"dcmle"'
codaMCMC-class Class '"codaMCMC"'
coef-method Class '"codaMCMC"'
coef-method Class '"dcmle"'
coerce-method Class '"codaMCMC"'
coerce-method Class '"dcCodaMCMC"'
coerce-method Class '"dcmle"'
confint-method Class '"MCMClist"'
confint-method Class '"codaMCMC"'
confint-method Class '"dcCodaMCMC"'
confint-method Class '"dcmle"'
crosscorr-method Class '"MCMClist"'
crosscorr-method Class '"codaMCMC"'
crosscorr-method Class '"dcmle"'
crosscorr.plot Generic after similar coda function
crosscorr.plot-method Class '"MCMClist"'
crosscorr.plot-method Class '"codaMCMC"'
crosscorr.plot-method Class '"dcmle"'
custommodel-class Class '"custommodel"'

-- D --

dcArgs-class Class '"dcArgs"'
dcCodaMCMC-class Class '"dcCodaMCMC"'
dcDiag-class Class '"dcDiag"'
dcdiag-class Class '"dcdiag"'
dcdiag-method Class '"codaMCMC"'
dcdiag-method Class '"dcCodaMCMC"'
dcdiag-method Class '"dcmle"'
dcFit-class Class '"dcFit"'
dcFunction-class Class '"dcFunction"'
dcInits-class Class '"dcInits"'
dcmle Asymptotic maximum likelihood estimation with data cloning
dcmle-class Class '"dcmle"'
dcModel-class Class '"dcModel"'
dcParams-class Class '"dcParams"'
dcsd-method Class '"codaMCMC"'
dcsd-method Class '"dcmle"'
dcTable-class Class '"dcTable"'
dctable-class Class '"dctable"'
dctable-method Class '"codaMCMC"'
dctable-method Class '"dcCodaMCMC"'
dctable-method Class '"dcmle"'
densityplot-method Class '"MCMClist"'
densityplot-method Class '"codaMCMC"'
densityplot-method Class '"dcmle"'
densplot-method Class '"MCMClist"'
densplot-method Class '"codaMCMC"'
densplot-method Class '"dcmle"'

-- E --

end-method Class '"codaMCMC"'
end-method Class '"dcmle"'

-- F --

frequency-method Class '"MCMClist"'
frequency-method Class '"codaMCMC"'
frequency-method Class '"dcmle"'

-- G --

gelman.diag Diagnostic functions set as generic
gelman.diag-method Class '"MCMClist"'
gelman.diag-method Class '"codaMCMC"'
gelman.diag-method Class '"dcmle"'
gelman.plot Diagnostic functions set as generic
gelman.plot-method Class '"MCMClist"'
gelman.plot-method Class '"codaMCMC"'
gelman.plot-method Class '"dcmle"'
geweke.diag Diagnostic functions set as generic
geweke.diag-method Class '"MCMClist"'
geweke.diag-method Class '"codaMCMC"'
geweke.diag-method Class '"dcmle"'
gsFit-class Class '"gsFit"'

-- H --

head-method Class '"codaMCMC"'
head-method Class '"dcmle"'
heidel.diag Diagnostic functions set as generic
heidel.diag-method Class '"MCMClist"'
heidel.diag-method Class '"codaMCMC"'
heidel.diag-method Class '"dcmle"'

-- L --

lambdamax.diag-method Class '"MCMClist"'
lambdamax.diag-method Class '"codaMCMC"'
lambdamax.diag-method Class '"dcmle"'

-- M --

makeDcFit Data object creators
makeGsFit Data object creators
mcmc-class Class '"mcmc"'
mcmc.list-class Class '"mcmc.list"'
mcmc.list.dc-class Class '"mcmc.list.dc"'
MCMClist-class Class '"MCMClist"'
mcpar-method Class '"MCMClist"'
mcpar-method Class '"codaMCMC"'
mcpar-method Class '"dcmle"'

-- N --

nchain-method Class '"MCMClist"'
nchain-method Class '"codaMCMC"'
nchain-method Class '"dcmle"'
nClones-class Class '"nClones"'
nclones-method Class '"codaMCMC"'
nclones-method Class '"dcCodaMCMC"'
nclones-method Class '"dcmle"'
niter-method Class '"MCMClist"'
niter-method Class '"codaMCMC"'
niter-method Class '"dcmle"'
nvar-method Class '"MCMClist"'
nvar-method Class '"codaMCMC"'
nvar-method Class '"dcmle"'

-- P --

pairs-method Class '"MCMClist"'
pairs-method Class '"codaMCMC"'
pairs-method Class '"dcmle"'
plot-method Class '"MCMClist"'
plot-method Class '"codaMCMC"'
plot-method Class '"dcmle"'

-- Q --

qqmath-method Class '"MCMClist"'
qqmath-method Class '"codaMCMC"'
qqmath-method Class '"dcmle"'
quantile-method Class '"MCMClist"'
quantile-method Class '"codaMCMC"'
quantile-method Class '"dcmle"'

-- R --

raftery.diag Diagnostic functions set as generic
raftery.diag-method Class '"MCMClist"'
raftery.diag-method Class '"codaMCMC"'
raftery.diag-method Class '"dcmle"'

-- S --

show-method Class '"codaMCMC"'
show-method Class '"dcFit"'
show-method Class '"dcmle"'
show-method Class '"gsFit"'
show-method Class '"summary.codaMCMC"'
show-method Class '"summary.dcCodaMCMC"'
show-method Class '"summary.dcmle"'
stack-method Class '"codaMCMC"'
stack-method Class '"dcmle"'
start-method Class '"codaMCMC"'
start-method Class '"dcmle"'
str-method Class '"dcCodaMCMC"'
str-method Class '"dcmle"'
summary-method Class '"codaMCMC"'
summary-method Class '"dcCodaMCMC"'
summary-method Class '"dcmle"'
summary.codaMCMC-class Class '"summary.codaMCMC"'
summary.dcCodaMCMC-class Class '"summary.dcCodaMCMC"'
summary.dcmle-class Class '"summary.dcmle"'

-- T --

tail-method Class '"codaMCMC"'
tail-method Class '"dcmle"'
thin-method Class '"MCMClist"'
thin-method Class '"codaMCMC"'
thin-method Class '"dcmle"'
time-method Class '"codaMCMC"'
time-method Class '"dcmle"'
traceplot-method Class '"MCMClist"'
traceplot-method Class '"codaMCMC"'
traceplot-method Class '"dcmle"'

-- U --

update-method Class '"dcmle"'

-- V --

varnames coda package related generic functions
varnames-method Class '"MCMClist"'
varnames-method Class '"codaMCMC"'
varnames-method Class '"dcmle"'
vcov-method Class '"codaMCMC"'
vcov-method Class '"dcmle"'

-- W --

window-method Class '"codaMCMC"'
window-method Class '"dcmle"'

-- X --

xyplot-method Class '"MCMClist"'
xyplot-method Class '"codaMCMC"'
xyplot-method Class '"dcmle"'

-- misc --

[-method Class '"codaMCMC"'
[-method Class '"dcCodaMCMC"'
[-method Class '"dcmle"'
[[-method Class '"codaMCMC"'
[[-method Class '"dcCodaMCMC"'
[[-method Class '"dcmle"'