rankList {dc3net}

Find Rank List

Description

rankList finds the rank of test list in the mutual information matrix of control to see any rank difference using mutual information matrix indexes.

Usage

rankList(topTest, mimCont)

Arguments

topTest

A data matrix that has columns 4 and 5 have mim indexes

mimCont

A mutual information matrix of control dataset

Details

rankList takes mim indexes from 4th and 5th columns of the data matrix and finds the rank of test list in the mutual information matrix of control to see any rank difference.

Value

rankList returns a data matrix that has ranks of test list in the control MI matrix

Author(s)

Gokmen Altay

References

Altay, G., Asim, M., Markowetz, F., Neal, D.E. (2011) Differential C3NET reveals disease netwokrs of direct physical interactions. BMC Bioinformatics. 12: 296.

See Also

dc3net, maxofMIM,