phylo_prune_missing_taxa {datelife}

Prune missing taxa from a phylo object Used inside phylo_get_subset_array and phylo_get_subset_array_congruify.

Description

Prune missing taxa from a phylo object Used inside phylo_get_subset_array and phylo_get_subset_array_congruify.

Usage

phylo_prune_missing_taxa(phy, taxa)

Arguments

phy

A user tree to congruify as phylo object (ape).

taxa

Vector of taxon names to get a subset for.

Value

A phylo object.