build_param {cxr} | R Documentation |
Build param structure
Description
Builds a nested list for the parameters of a given metapopulation
Usage
build_param(sp, sites, rates, env, num.params = NULL)
Arguments
sp |
character vector with species names |
sites |
character vector with site names |
rates |
character vector, vital rate names |
env |
boolean, whether environment is accounted for |
num.params |
optional, integer giving the number of parameters to account for. If not specified, it will include environment interactions with all species densities. E.g. if 3 sp and env = TRUE, there will be 7 params (intercept + 6 betas) |
Value
nested list of the form 'list[[sp]][[site]]'. Each of these elements is a NA matrix with vital rates in rows and expected parameters in columns.
Examples
sp <- c("s1","s2","s3")
sites <- c("sa","sb")
rates <- c("Sj","Sn","Sr","Rn","Rr","D","O")
env <- TRUE
param <- build_param(sp = sp,sites = sites,rates = rates,env = env)
[Package cxr version 1.1.1 Index]