bestKeeper {ctrlGene}

Determines stability of genes

Description

This function combines the results of cpSta(), pearsonCor() and bki().

Usage

bestKeeper(expression, ctVal = TRUE)

Arguments

expression

a matrix of expression levels. Each row corresponds to a sample and each column to a gene.

ctVal

a logical value indicating data type. If ct-values are input, ctVal=TRUE, otherwise, ctVal=FALSE.

Value

A list containing CP.statistics, pair.Wise.cor and HKG.vs.BestKeeper, which are returned by cpSta(), pearsonCor() and bki(), respectively.

References

Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. Biotechnol Lett (2004) <doi: 10.1023/B:BILE.0000019559.84305.47>

Examples

FIBct
bestKeeper(FIBct)