gfilter.np {crosstalkr}

Method to filter graph based on network potential values.

Description

convenience function - it just calls gfilter.value after computing np

Usage

gfilter.np(g, val, use_ppi = TRUE, n = 500, desc, ...)

Arguments

g

igraph object

val

named numeric vector - some measure of node state (i.e. gene expression in the case of a PPI)

use_ppi

bool - should we use a ppi from online repository?

n

int - number of nodes to include in the returned subgraph

desc

bool - do we want the top or bottom examples of the provided metric

...

additional params passed to load_ppi() or compute_crosstalk()

Details

For more information on network potential, see related paper

Value

igraph