countland {countland}

Initialize a countland object from a dgCMatrix

Description

Initialize a countland object from a dgCMatrix

Usage

countland(m, remove_empty = TRUE, verbose = TRUE)

Arguments

m

A matrix of counts (dense or sparse)

remove_empty

filter out cells and genes with no observed counts (default=TRUE)

verbose

show stderr message statements (default=TRUE)

Value

countland object

Examples

gold_path <- system.file("testdata", package = "countland", mustWork = TRUE)
gold.data <- Seurat::Read10X(data.dir = gold_path)
C <- countland(gold.data)