SubsetCells {countland}

Subsets cells using a vector of cell indices

Description

Subsets cells using a vector of cell indices

Usage

SubsetCells(C, cell_indices, remove_empty = TRUE)

Arguments

C

countland object

cell_indices

vector of cell index values

remove_empty

filter out cells and genes with no observed counts (default=TRUE)

Value

countland object, count matrix updated

Examples

gold_path <- system.file("testdata", package = "countland", mustWork = TRUE)
gold.data <- Seurat::Read10X(data.dir = gold_path)
C <- countland(gold.data)
C <- SubsetCells(C,cell_indices=1:50)