ScoreCells {countland}

Calculate several scores for counts across cells

Description

Calculate several scores for counts across cells

Usage

ScoreCells(C, gene_string = NULL)

Arguments

C

countland object

gene_string

string with regular expression expression matching gene names of interest (default=NULL)

Value

countland object with slot cell_scores

Examples

gold_path <- system.file("testdata", package = "countland", mustWork = TRUE)
gold.data <- Seurat::Read10X(data.dir = gold_path)
C <- countland(gold.data)
C <- ScoreCells(C,gene_string="*149932$")