PlotIMA {countland}

Plot cells using integer matrix approximation

Description

Plot cells using integer matrix approximation

Usage

PlotIMA(C, x = 1, y = 2, colors = color_palette, subsample = TRUE)

Arguments

C

countland object

x

feature on x-axis, integer (default=1)

y

feature on y-axis, integer (default=2)

colors

color palette for ggplot2, default=palette of 11 colors

subsample

if TRUE, use subsampled counts (default), otherwise use counts

Value

generates plot of cells using integer matrix approximation