PlotGeneCounts {countland} | R Documentation |
Generate a strip plot for counts across selected genes
Description
Generate a strip plot for counts across selected genes
Usage
PlotGeneCounts(C, gene_indices, colors = color_palette)
Arguments
C |
countland object |
gene_indices |
vector of gene index values |
colors |
color palette for ggplot2, default=palette of 11 colors |
Value
generates plot of gene count distributions
Examples
gold_path <- system.file("testdata", package = "countland", mustWork = TRUE)
gold.data <- Seurat::Read10X(data.dir = gold_path)
C <- countland(gold.data)
PlotGeneCounts(C,gene_indices=1:10)
[Package countland version 0.1.2 Index]