PlotEigengap {countland} | R Documentation |
Plots eigenvalues to investigate the optimal number of clusters
Description
Plots eigenvalues to investigate the optimal number of clusters
Usage
PlotEigengap(C)
Arguments
C |
countland object |
Value
generates plot of eigenvalues by number of components
Examples
gold_path <- system.file("testdata", package = "countland", mustWork = TRUE)
gold.data <- Seurat::Read10X(data.dir = gold_path)
C <- countland(gold.data)
C <- Dot(C)
C <- Embed(C,n_components=5)
PlotEigengap(C)
[Package countland version 0.1.2 Index]