SBS96_ID_to_SBS192_ID {cosmicsig} | R Documentation |
Translate SBS96 signature IDs to SBS192 signature IDs by adding "-E" if necessary
Description
"-E" added to the name of a transcriptional strand bias signature indicates that it was extracted only from exome sequencing data, and thus reflects transcriptional strand bias in the exome rather than in the entire transcript, including introns.
Usage
SBS96_ID_to_SBS192_ID(sig_ids)
Arguments
sig_ids |
Character vector of SBS96 signature IDs. |
Value
Character vector of corresponding SBS192 signature IDs; some have "-E" (for exome) post-pended.
Examples
sbs96_ids <- c("SBS1", "SBS23", "SBS25")
sbs192_ids <- SBS96_ID_to_SBS192_ID(sbs96_ids)
[Package cosmicsig version 1.1.1 Index]