barplot2 |
barplot2 - Bar plot with upper error bars |
corto |
Calculate a regulon from a data matrix |
fcor |
A fast correlation function |
fisherp |
Fisher integration of p-values |
gsea |
GSEA |
gsea2 |
2-way GSEA GSEA Gene set enrichment analysis of two complementary gene sets using gsea |
kmgformat |
kmgformat - Nice Formatting of Numbers |
mra |
Perform Master Regulator Analysis (mra). |
mraplot |
Plot a master regulator analysis |
p2r |
p2r Convert a P-value to the corresponding Correlation Coefficient |
p2z |
p2z |
plot_gsea |
Plot GSEA results |
plot_gsea2 |
Plot 2-way GSEA results |
r2p |
r2p Convert Correlation Coefficient to P-value |
scatter |
scatter - XY scatter plot with extra information |
scinot |
scinot - Convert a number to a scientific notation expression |
slice |
Slice |
ssgsea |
ssGSEA |
stouffer |
Stouffer integration of Z scores |
textrepel |
textrepel - Plot text with non-overlapping labels |
val2col |
val2col - Convert a numeric vector into colors |
wstouffer |
Weighted Stouffer integration of Z scores |
z2p |
z2p |