Multi-Purpose Core Subset Selection


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Documentation for package ‘corehunter’ version 3.2.3

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coreHunterData Initialize Core Hunter data.
distances Create Core Hunter distance data from matrix or file.
evaluateCore Evaluate a core collection using the specified objective.
exampleData Small example dataset with 218 individuals.
genotypes Create Core Hunter genotype data from data frame, matrix or file.
getAlleleFrequencies Get Allele frequency matrix.
getNormalizationRanges Determine normalization ranges of all objectives in a multi-objective configuration.
objective Create Core Hunter objective.
phenotypes Create Core Hunter phenotype data from data frame or file.
read.autodelim Read delimited file.
sampleCore Sample a core collection.
setRange Set the normalization range of the given objective.
wrapData Wrap distances, genotypes or phenotypes in Core Hunter data.