| coreCollection-package {coreCollection} | R Documentation |
The coreCollection package
Description
This package can be used to create a CoreCollection object.
Author(s)
Matthijs Brouwer <matthijs.brouwer@wur.nl>
References
Odong, T.L. (2012) Quantative methods for sampling of germplasm collections -
Getting the best out of molecular markers when creating core collections. PhD diss., Wageningen
University and Research, Wageningen, The Netherlands. http://edepot.wur.nl/212422
Jansen, J & Hintum, Theo. (2007) Genetic distance sampling: A novel
sampling method for obtaining core collections using genetic distances with an
application to cultivated lettuce. TAG. Theoretical and applied genetics.
Theoretische und angewandte Genetik. 114. 421-8. 10.1007/s00122-006-0433-9
See Also
- vcfR provides a suite of tools for input and output of variant call format (VCF) files, manipulation of their content and visualization.
- adegenet provides the genlight class for genome-wide SNP data, and includes a method to create a distance matrix.
Other core collection:
CoreCollection()