plotClusterBoxPlotsByAppType {conos}

Generate boxplot per cluster of the proportion of cells in each celltype

Description

Generate boxplot per cluster of the proportion of cells in each celltype

Usage

plotClusterBoxPlotsByAppType(
  conos.obj,
  clustering = NULL,
  apptypes = NULL,
  return.details = FALSE
)

Arguments

conos.obj

conos object

clustering

name of the clustering to use (default=NULL)

apptypes

a factor specifying how to group the samples (default=NULL)

return.details

boolean If TRUE return a list with the plot and the summary data.frame (default=FALSE)

Value

Boxplot per cluster of the proportion of cells in each celltype