summary.S2CFA {confreq}

S3 Summary for S2CFA

Description

S3 summary method for object of class"S2CFA"

Usage

## S3 method for class 'S2CFA'
summary(
  object,
  digits = 3,
  type = "ex.fisher.test",
  sorton = NULL,
  decreasing = FALSE,
  showall = TRUE,
  adjalpha = "bonferroni",
  ...
)

Arguments

object

object of class"S2CFA"

digits

integer rounds the values to the specified number of decimal places, default is digits=3.

type

character with default type="ex.fisher.test", to return wether the observed pattern are 'discriminating Types' or not significant at all based on the respective p-value. Another option for type is type="pChi".

sorton

sort results of local test by any column. By default the output is not sorted. Other options may be "pat.", "disc.Type", etc. ... So all column names that can potentially appear in the result.

decreasing

logical. Should the sort be increasing or decreasing? see order

showall

logical with default showall = TRUE. To return only significant pattern (discriminating types) set it to showall = FALSE.

adjalpha

character with default adjalpha = "bonferroni". Selector for the type of alpha adjustment for multiple testing. Possible options are: adjalpha = "none", for no adjustment; adjalpha = "bonferroni", for bonferroni adjustment (default); adjalpha = "holm", for alpha adjustment according to Holm (1979); other options to come ... .

...

other parameters passed trough.

Value

a summary of the results printed on the console.

References

Holm, S. (1979). A simple sequentially rejective multiple test procedure. Scandinavian Journal of Statistics, 6(2), 65–70.

Bonferroni, C. E. (1935). Il calcolo delle assicurazioni su gruppi di teste. In S.O. Carboni (Ed.), Studi in Onore del Professore Salvatore Ortu Carboni (S. 13–60). Roma, Tipografia del Senato: Bardi.