condor-package {condor}

Interact with Condor from R via SSH

Description

Interact with Condor from R via SSH connection. Files are first uploaded from user machine to submitter machine, and the job is then submitted from the submitter machine to Condor. Functions are provided to submit, list, and download Condor jobs from R.

Condor is an open source high-throughput computing software framework for distributed parallelization of computationally intensive tasks.

Details

Main interface:

condor_submit	submit
condor_q	list queue
condor_dir	list directories
condor_download	download

Stop and remove:

condor_rm	stop jobs
condor_rmdir	remove directories

Utilities:

condor_log	show log file
summary.condor_log	show log file summary
ssh_exec_stdout	execute command

Author(s)

Arni Magnusson and Nan Yao, with contributions by Jemery Day and Thomas Teears.

References

https://github.com/PacificCommunity/ofp-sam-condor

https://htcondor.org

See Also

condor uses the ssh package to connect to the Condor submitter machine.