Easy Concatenation of Fasta Sequences

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Documentation for package ‘concatipede’ version 1.0.1

Help Pages

auto_match_seqs Build a template table with automatically matched sequence names
concatipede Concatenate alignments
concatipede_example Get the path to one of concatipede example files
concatipede_prepare Load alignments and prepare template correspondence table for concatenate () function
find_fasta Find fasta files present in a folder
get_genbank_table Extract GenBank accession number from correspondence table
read_xl Read an Excel file
rename_sequences Rename sequences
write_aln Writing alignments
write_fasta Writing alignments
write_nexus Writing alignments
write_phylip Writing alignments
write_xl Write an Excel file