auto_match_seqs |
Build a template table with automatically matched sequence names |
concatipede |
Concatenate alignments |
concatipede_example |
Get the path to one of concatipede example files |
concatipede_prepare |
Load alignments and prepare template correspondence table for concatenate () function |
find_fasta |
Find fasta files present in a folder |
get_genbank_table |
Extract GenBank accession number from correspondence table |
read_xl |
Read an Excel file |
rename_sequences |
Rename sequences |
write_aln |
Writing alignments |
write_fasta |
Writing alignments |
write_nexus |
Writing alignments |
write_phylip |
Writing alignments |
write_xl |
Write an Excel file |