combi |
Compute combinations. |
combiroc_long |
Reshape combiroc data in long format. |
combi_score |
Compute the combi score using glm(link='binomial') models and optionally classifies the samples. |
combs_with |
Show combinations with given markers. |
demo_data |
A demo dataset with proteomics markers |
demo_unclassified_data |
A demo dataset with unlabeled proteomics markers |
load_data |
Load CombiROC data. |
markers_distribution |
Show distribution of intensity values for all the markers both singularly and all together. |
ranked_combs |
Rank combinations. |
roc_reports |
Train logistic regression and compute ROC. |
seurat_to_combiroc |
Load CombiROC data. |
show_markers |
Show the composition of combinations. |
single_markers_statistics |
Provide statistics for each marker. |