colocalized_sequential {colocalized} | R Documentation |
Sequential cluster search
Description
Search one chromosome for clusters using default non-parallel processing.
Usage
colocalized_sequential(choose, chr, n)
Arguments
choose |
List of .bed tables |
chr |
Chromosome to be searched given as e.g. "chr19" |
n |
Cut-off distance between colocalized sequences |
Value
Table containing the addresses (as one dimensional intervals) of the members of every cluster, with some annotation data.
Examples
complex<-list(nfkb1,nfkb2,relb)
colocalized_sequential(complex,"chrY",150)
[Package colocalized version 0.2.0 Index]