code {cohortBuilder}

Return reproducible data filtering code.

Description

Return reproducible data filtering code.

Usage

code(
  x,
  include_source = TRUE,
  include_methods = c(".pre_filtering", ".post_filtering", ".run_binding"),
  include_action = c("pre_filtering", "post_filtering", "run_binding"),
  modifier = .repro_code_tweak,
  mark_step = TRUE,
  ...
)

Arguments

x

Cohort object.

include_source

If 'TRUE' source generating code will be included.

include_methods

Which methods definition should be included in the result.

include_action

Which action should be returned in the result. 'pre_filtering'/'.post_filtering' - to include data transformation before/after filtering. s'run_binding' - data binding transformation.

modifier

A function taking data frame (storing reproducible code metadata) as an argument, and returning data frame with 'expr' column which is then combined into a single expression (final result of 'get_code'). See .repro_code_tweak.

mark_step

Include information which filtering step is performed.

...

Other parameters passed to tidy_source.

Value

tidy_source output storing reproducible code for generating final step data.

See Also

cohort-methods